Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927648.1_cds_XP_016475411.1_67348
CDS Infomation

[gene=LOC107797071] [db_xref=GeneID:107797071] [protein=serine carboxypeptidase-like 40] [protein_id=XP_016475411.1] [location=join(138800..139190,139677..139784,139882..140156,141580..141834,142467..142585,143331..143423,143563..143668,144606..144758)] [gbkey=CDS]
Sequence

ATGGAGACATTCAAGTCCACTACTTCTCTTCTTTTATTGACTCTCTTTCTTTCAAGCACT
GTAACTCAAATCTTTGGAGTCAAGACACAAAGTGAAGCCCTTGGCCAATTTTACAAGGCT
AAGTTTAGGCACAATTCCAACATTGATAAAAGCCATTTTACTCATGATTTTGATGATCAA
GATCTCAAATATCTTCATAATAAAAAAACTGTGGTTTCTCAAAAAGAAAATGACAAGATT
CAGAAACTTCCTGGCCAACCTCGAGTAAGGTTTGAGCAGTATGGTGGATATGTTACAGTT
GATGAATCTGCTGGGAGAGCTTTCTATTATTACTTTGTTGAAGCTCAACGTTCTAAAGAC
TCTTTGCCTCTTCTTCTTTGGCTTAATGGAGGTCCAGGATGTTCTTCTCTTGCATATGGA
GCCTTTCAAGAACTTGGACCATTTAGAGTAAACAGTGATGGCAAAACACTTCACAAAAAT
AAATTTGCATGGAATCATGCTGCCAATGTGTTATTCTTGGAGTCTCCAGCAGGAGTAGGT
TTTTCCTACTCTAACACATCATCTGATGTTAAGATAGGTGGAGATAGAAAAACAGCTAAA
GATAATTATCAGTTCTTAGTAAATTGGCTGGAAAGATTTCCTGAATACAAAGATAAAGAT
TTTTACATATCTGGAGAGAGTTATGCTGGTCATTATGTACCTCAATTGGCACATACCATT
CTATATCACAACAAGAAGGCAAACAAGACTATGGTTAATCTTAAAGGAATTTTGATTGGT
AATGCAGTGATTAATGATGAGACAGATACAAGAGGAATGTATGAATATTTTGCAAGTCAT
GCACTGATTTCTGATGAACTTGAAGCTCAAATCCAGAAGCAATGCAAGTTCACAGAGAGT
TCAGAATCAGACGAGTGCAAATTGGCACGAAGTAAAGCTGAATATAATACTGACCCCATT
GATATCTACAACATATATGCTCCACTCTGCCATAATACCAATCTCACTGCCAAGCCCAAG
AAGCCTTCTTTAGTGATCGATCCATGTAGTGATTATTACACGATTGCCTATATGAATAGG
CCTGATGTTCAGAATTCTCTCCATGCCAATGTCACCAACATTAAATATTCAAATTGGCAG
CCATGCAGTGATGTCCTAACAAATTGGACAGACAGCTCATCAACCATTATTCCTCTTCTC
AGAGAGTTTATGACAAATGGACTTCGAGTGTGGATATTCAGCGGTGACACTGATGGAAGA
GTGCCTGTTACTTCAACCAAGAATTCTATTAAGATAATGAAGCTTCCTATCAAAACTGCG
TGGCACCCCTGGTACCTCAGTGCAGAGGTTGGTGGATATACACAAGTATATAAAGGAGAC
ATGACATTTGCAACAGTACGAGGGGCAGGACATCAAGTACCAAGTTATGAGGCAGCTAGA
TCCCTTTCACTTGTCATGCATTTTCTTGCTGGAACTGACCTCCCCGATAAACACAATTAA

Peptide Sequence

PEP ID

XP_016475411.1
PEP Infomation

PREDICTED: serine carboxypeptidase-like 40 [Nicotiana tabacum]
Sequence

METFKSTTSLLLLTLFLSSTVTQIFGVKTQSEALGQFYKAKFRHNSNIDKSHFTHDFDDQ
DLKYLHNKKTVVSQKENDKIQKLPGQPRVRFEQYGGYVTVDESAGRAFYYYFVEAQRSKD
SLPLLLWLNGGPGCSSLAYGAFQELGPFRVNSDGKTLHKNKFAWNHAANVLFLESPAGVG
FSYSNTSSDVKIGGDRKTAKDNYQFLVNWLERFPEYKDKDFYISGESYAGHYVPQLAHTI
LYHNKKANKTMVNLKGILIGNAVINDETDTRGMYEYFASHALISDELEAQIQKQCKFTES
SESDECKLARSKAEYNTDPIDIYNIYAPLCHNTNLTAKPKKPSLVIDPCSDYYTIAYMNR
PDVQNSLHANVTNIKYSNWQPCSDVLTNWTDSSSTIIPLLREFMTNGLRVWIFSGDTDGR
VPVTSTKNSIKIMKLPIKTAWHPWYLSAEVGGYTQVYKGDMTFATVRGAGHQVPSYEAAR
SLSLVMHFLAGTDLPDKHN

Transcript Sequence

Gene sequence data has not been registered.